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Das Lab

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  1. KaggleOpenVaccine KaggleOpenVaccine Public archive

    Jupyter Notebook 56 7

  2. RiboGraphViz RiboGraphViz Public

    Visualize global properties of large RNAs using GraphViz force-directed layout.

    Jupyter Notebook 24 9

  3. openvaccine-CE-analysis openvaccine-CE-analysis Public archive

    Data and analysis of capillary electrophoresis data measuring mRNA degradation rates for Combinatorial Optimization of mRNA paper, Das and Barna labs (2020).

    Jupyter Notebook 10 3

  4. casp-rna casp-rna Public archive

    Pipeline used to assess RNA in CASP15

    Jupyter Notebook 9 2

  5. rna_benchmark rna_benchmark Public archive

    Python scripts & reference data for Rosetta RNA modeling benchmarks

    Scala 8 2

  6. FARFAR2-SARS-CoV-2 FARFAR2-SARS-CoV-2 Public archive

    Models of SARS-CoV-2 genomic elements generated by FARFAR2

    8 1

Repositories

Showing 10 of 54 repositories
  • DasLab.github.io Public

    Static Jekyll site for daslab.stanford.edu

    DasLab/DasLab.github.io's past year of commit activity
    HTML 0 0 0 0 Updated Nov 3, 2026
  • cmuts-space Public

    cmuts — mutation counting for chemical mapping (mirror of Hugging Face Space daslab-stanford/cmuts)

    DasLab/cmuts-space's past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 20, 2026
  • cmuts Public

    High-throughput mutation and indel counting software

    DasLab/cmuts's past year of commit activity
    C 4 MIT 1 0 1 Updated Oct 20, 2026
  • fld Public

    Fast Library Design for MaP-seq experiments

    DasLab/fld's past year of commit activity
    C++ 2 MIT 1 0 0 Updated Oct 13, 2026
  • ubr Public

    Ultraplex-Bowtie2-RNAframework pipeline for analysis of SHAPE-MaP/DMS-MaP big library runs

    DasLab/ubr's past year of commit activity
    MATLAB 3 MIT 1 0 0 Updated Oct 12, 2026
  • rmdb.github.io Public

    Static GitHub Pages site for the RNA Mapping Database (rmdb.stanford.edu)

    DasLab/rmdb.github.io's past year of commit activity
    HTML 1 0 0 0 Updated Sep 19, 2026
  • k1_tools Public

    Tools for the Kaggle 2025 RNA 3D structure prediction competition (k1)

    DasLab/k1_tools's past year of commit activity
    Python 0 0 0 0 Updated Jun 11, 2026
  • primerize.github.io Public

    Primerize static website — hosted on GitHub Pages at primerize.stanford.edu

    DasLab/primerize.github.io's past year of commit activity
    HTML 0 0 0 0 Updated May 21, 2026
  • Server_RMDB Public

    RNA Mapping Database

    DasLab/Server_RMDB's past year of commit activity
    JavaScript 4 4 44 0 Updated May 16, 2026
  • Server_Daslab-OLD Public

    Das Lab Website

    DasLab/Server_Daslab-OLD's past year of commit activity
    HTML 1 3 5 3 Updated May 15, 2026
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