morphometry

DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation

Tools for MRI mouse brain morphometry

A python module designed to reduce your brain load while accessing FreeSurfer brain surface and morphometry data files of single subjects and groups.

Fluvial Corridor Toolbox QGis Plugin

ITK filters that quantify bone morphometry

This plugin provides tools for geomorphological analysis in drainage basins.

Symmetrization of 2D pattern using nonrigid landmark registration

implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura

Stereological macros for ImageJ

MorphoHub software modules and its code

Source code and workflow protocols for SOCR 3D Cell Morphometry Project

Fluvial Corridor Toolbox Applications

Brain Morphometry Estimation: From Hours to Seconds Using Deep Learning

Segment and measure branching shapes: centerlines, hierarchical space partitioning, and width.

Cell counter integrated with Grid for manual morphometry

Lightweight particle instance segmentation and quantitative morphology analysis with YOLO, Labelme and OpenCV.

Plugin de QGIS que delimita cuencas hidrográficas automáticamente a partir de un DEM y puntos de exutorio, calculando índices morfométricos (Kc, Rr, Dd) y perfiles topográficos por cuenca. Pipeline de 9 pasos con Whitebox Workflows, GDAL y la API de QGIS. Desarrollado en la Escuela de Geografía, UACh.

S²M - Single Subject Morphometry Tool

Semi-automated ImageJ macro for cerebellar lobule segmentation and length quantification. Supports boundary detection, Purkinje cell-based mask refinement, and ROI export for downstream analysis.

Longitudinal Imaging Deformation Analysis Repository